Return the most/less variant sites of a dataframe or a RiboClass — get_variant_sites • rRMSAnalyzer

Return the most/less variant sites of a dataframe or a RiboClass

Usage

get_variant_sites(
  ribo,
  n = 20,
  type_of_variant = "most",
  only_annotated = TRUE
)

Arguments

ribo: a RiboClass object.
n: Number of top sites to return.
type_of_variant: Either "less" or "most", to select the top n less variant sites or the top n most variant sites respectively.
only_annotated: (RiboClass only) Check variability only among annotated sites. Ignored when df is a dataframe.

Value

A dataframe with the n most/less variant sites