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Plot statistic

Source: R/plot_stat.R
plot_stat.Rd

Plot statistic

Usage

plot_stat(
  ribo = ribo_adj_annot,
  p_cutoff = 0.01,
  cscore_cutoff = 0.5,
  adjust_pvalues_method = "fdr",
  site = NULL,
  res_pv = res_pv,
  pthr = NULL,
  condition_col = NULL
)

Arguments

ribo

a RiboClass

p_cutoff

cutoff of c-score under which sites are not taken in account

cscore_cutoff
adjust_pvalues_method
site

sites to plot

res_pv

df of p values extracted from res_pv.R

pthr

p value threshold

condition_col

the condition column passed in params of the Rmd

Value

a boxplot

Examples

plot_stat(data = ribo, site = NULL, res_pv = res_pv, pthr = 0.05)
#> Error in plot_stat(data = ribo, site = NULL, res_pv = res_pv, pthr = 0.05): unused argument (data = ribo)