Print Welch result in report
Examples
data("ribo_toy")
data("human_methylated")
ribo_toy <- remove_ribo_samples(ribo_toy,c("RNA1", "RNA2"))
ribo_toy <- rename_rna(ribo_toy)
ribo_toy <- annotate_site(ribo_toy,
annot = human_methylated,
anno_rna = "rRNA",
anno_pos = "Position",
anno_value = "Nomenclature")
comparisons <- tibble::tibble(comp = c("comp1"),
ctrl = c("cond1"),
cases = c("cond2") )
ctrl <- comparisons$ctrl
cases <- comparisons$cases
render_html_welch(ribo_toy, "condition", ctrl, cases, pthr = 0.05, cscore_cutoff = 0.05)
#> $ui
#> <h4>cond2 vs cond1</h4>
#> <div class="datatables html-widget html-fill-item" id="htmlwidget-ac96cb3ee4656e2e9ec3" style="width:100%;height:auto;"></div>
#> <script type="application/json" 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#> <p>This panel displays boxplots of C-scores for rRNA 2'Ome sites identified
#> as significantly different between the two biological conditions cond2
#> and cond1, based on Welch's t-test results. Significance was defined by
#> two criteria: adjusted p-value < 0.05 and |deltaC-score| > 0.05. Each boxplot
#> shows the distribution of C-scores per condition, based on the summary
#> table presented above. Colors are attributed to each biological group,
#> enabling visual comparison of 2'Ome levels between conditions.</p>
#>
#> $plot
#>